Genomics

Dataset Information

303

ChIP-exo analysis of the DNA-binding sites of the yeast transcription factor Yfl052w sequenced by SOLiD


ABSTRACT: We determined DNA-binding sites of the yeast transcription factor Yfl052w by ChIP-exo. Cells were grown in the YP media containing palatinose. Yfl052w was tagged with HA tag and anti-HA antibody was used for the immunoprecipitation. Examination of Yfl052 trancription factor in HA-tagged and wt cells (as a control)

ORGANISM(S): Saccharomyces cerevisiae  

SUBMITTER: Ksenia Pougach  

PROVIDER: E-GEOD-57901 | ArrayExpress | 2014-07-24

SECONDARY ACCESSION(S): SRP042194GSE57901PRJNA248391

REPOSITORIES: GEO, ArrayExpress, ENA

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Publications

Duplication of a promiscuous transcription factor drives the emergence of a new regulatory network.

Pougach Ksenia K   Voet Arnout A   Kondrashov Fyodor A FA   Voordeckers Karin K   Christiaens Joaquin F JF   Baying Bianka B   Benes Vladimir V   Sakai Ryo R   Aerts Jan J   Zhu Bo B   Van Dijck Patrick P   Verstrepen Kevin J KJ  

Nature communications 20140910


The emergence of new genes throughout evolution requires rewiring and extension of regulatory networks. However, the molecular details of how the transcriptional regulation of new gene copies evolves remain largely unexplored. Here we show how duplication of a transcription factor gene allowed the emergence of two independent regulatory circuits. Interestingly, the ancestral transcription factor was promiscuous and could bind different motifs in its target promoters. After duplication, one paral  ...[more]

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