Transcriptomics

Dataset Information

32

Gene expression profiling of PRDM2 Knockdown in proliferating, quiescent and differentiating myoblasts


ABSTRACT: This SuperSeries is composed of the SubSeries listed below. Refer to individual Series

ORGANISM(S): Mus musculus  

SUBMITTER: Sirisha Cheedipudi   

PROVIDER: E-GEOD-58676 | ArrayExpress| 2015-08-19

SECONDARY ACCESSION(S): GSE58676PRJNA253136

REPOSITORIES: GEO, ArrayExpress

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Publications

A fine balance: epigenetic control of cellular quiescence by the tumor suppressor PRDM2/RIZ at a bivalent domain in the cyclin a gene.

Cheedipudi Sirisha S   Puri Deepika D   Saleh Amena A   Gala Hardik P HP   Rumman Mohammed M   Pillai Malini S MS   Sreenivas Prethish P   Arora Reety R   Sellathurai Jeeva J   Schrøder Henrik Daa HD   Mishra Rakesh K RK   Dhawan Jyotsna J  

Nucleic acids research 20150603 13


Adult stem cell quiescence is critical to ensure regeneration while minimizing tumorigenesis. Epigenetic regulation contributes to cell cycle control and differentiation, but few regulators of the chromatin state in quiescent cells are known. Here we report that the tumor suppressor PRDM2/RIZ, an H3K9 methyltransferase, is enriched in quiescent muscle stem cells in vivo and controls reversible quiescence in cultured myoblasts. We find that PRDM2 associates with >4400 promoters in G0 myoblasts, 5  ...[more]

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