Transcriptomics

Dataset Information

2

Anaerobic Degradation of Butyrate By the Hyperthermophilic Archaeon, Ferroglobus placidus


ABSTRACT: Comparison of acetate- to butyrate-grown F. placidus cells to identify genes that are potentially involved in fatty acid degradation by this unique hypertherophilic archaeon. A four chip study using total RNA recovered from three separate cultures of Ferroglobus placidus DSM 10642 grown with 1 mM butyrate (experimental condition) and three separate cultures of Ferroglobus placidus DSM 10642 grown on 10 mM acetate (control condition). Each chip measures the expression level of 2613 genes from Ferroglobus placidus DSM 10642 with nine 45-60-mer probe pairs (PM/MM) per gene, with three-fold technical redundancy.

ORGANISM(S): Ferroglobus placidus  

SUBMITTER: Dawn E Holmes   Derek Lovley  Carla Risso  Dawn Holmes  Jessica Smith 

PROVIDER: E-GEOD-59465 | ArrayExpress | 2014-10-01

SECONDARY ACCESSION(S): GSE59465PRJNA255391

REPOSITORIES: GEO, ArrayExpress

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