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Omics score: 99

Intra-macrophage transcriptome of Salmonella enterica serovar Typhimurium 4/74 using strand-specific RNA-seq

ABSTRACT: Bacterial transcription is controlled by many transcription factors and promoters. Currently many promoters are mapped only in in vitro conditions. We use an intra-macrophage model to map the promoters and their expression in vivo. Transcriptome analysis of S.Typhimurium 4/74 within macrophages using RNA-seq in biological replicates. dRNA-seq also performed in biological replicates.

ORGANISM(S): Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344

SUBMITTER: Magali Hèbrard Shabarinath Srikumar Katie Breen Laura Luque Andrew D Cameron Karsten Hokamp Carsten Kröger Michael Beckett Daoguo Zhou Aoife Colgan Jay C Hinton Lu Wang Sathesh K Sivasankaran

PROVIDER: E-GEOD-59945 | ArrayExpress | 2015-08-19

SECONDARY ACCESSION(S): GSE59945SRP045115PRJNA257106

REPOSITORIES: GEO, ArrayExpress, ENA

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