Transcriptomics

Dataset Information

300

Drosophila Imp iCLIP identifies an RNA assemblage co-ordinating F-actin formation


ABSTRACT: In this study, we employed a combination of RIP-seq and short- and long-wave iCLIP technologies to identify transcripts associated with cytoplasmic RNPs containing the RNA-binding protein Drosophila Imp. We also made a Imp knockdown vs luciferase control experiment. Two biological iCLIP-seq, as well as two mRNAseq made on cells harvested on the same day. Two biological PAR-iCLIP-seq. Two biological RIP-seq, as well as two mRNAseq made on cells harvested on the same day. Three biological mRNAseq of imp dsRNA treated cells as well as three control mRNAseq of cells treated with Luciferase dsRNA.

ORGANISM(S): Drosophila melanogaster  

SUBMITTER: Heidi T Hansen   Mireya Plass  Simon H Rasmussen  Sidsel A Adolph  Jeremy Sanford  Jan Christiansen  Anders Krogh  Finn C Nielsen 

PROVIDER: E-GEOD-62997 | ArrayExpress | 2015-05-27

SECONDARY ACCESSION(S): SRP049555GSE62997PRJNA266435

REPOSITORIES: GEO, ArrayExpress, ENA

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