Transcriptomics,Multiomics

Dataset Information

11

Transcription profiling by array of Arabidopsis mutant for arf19, arf2, axr3, iaa5, iaa6, iaa19, iaa17 or nph4 after treatment with indole-3-acetic acid


ABSTRACT: Global gene expression data from 7-day old light-grown liquid cultured seedlings treated with or without auxin (5µM IAA) for 2 h.

REANALYSED by: E-GEOD-630

OTHER RELATED OMICS DATASETS IN: PRJNA87537E-GEOD-631PRJNA89755E-GEOD-627PRJNA89753

INSTRUMENT(S): 418 [Affymetrix]

ORGANISM(S): Arabidopsis thaliana  

SUBMITTER: Yoko Okushima  

PROVIDER: E-GEOD-630 | ArrayExpress | 2008-06-14

SECONDARY ACCESSION(S): GSE630PRJNA87537

REPOSITORIES: GEO, ArrayExpress

Dataset's files

Source:
Action DRS
E-GEOD-630.idf.txt Idf
E-GEOD-630.processed.1.zip Processed
E-GEOD-630.raw.1.zip Raw
E-GEOD-630.raw.2.zip Raw
E-GEOD-630.sdrf.txt Txt
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Publications

Functional genomic analysis of the AUXIN RESPONSE FACTOR gene family members in Arabidopsis thaliana: unique and overlapping functions of ARF7 and ARF19.

Okushima Yoko Y   Overvoorde Paul J PJ   Arima Kazunari K   Alonso Jose M JM   Chan April A   Chang Charlie C   Ecker Joseph R JR   Hughes Beth B   Lui Amy A   Nguyen Diana D   Onodera Courtney C   Quach Hong H   Smith Alison A   Yu Guixia G   Theologis Athanasios A  

The Plant cell 20050119 2


The AUXIN RESPONSE FACTOR (ARF) gene family products, together with the AUXIN/INDOLE-3-ACETIC ACID proteins, regulate auxin-mediated transcriptional activation/repression. The biological function(s) of most ARFs is poorly understood. Here, we report the identification and characterization of T-DNA insertion lines for 18 of the 23 ARF gene family members in Arabidopsis thaliana. Most of the lines fail to show an obvious growth phenotype except of the previously identified arf2/hss, arf3/ett, arf5  ...[more]

Publication: 1/2

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