Transcriptomics

Dataset Information

4

Transcription profiling of S. cerevisiae Histone H3 K4,36,79R mutant 6 hr


ABSTRACT: Total RNA from two replicate cultures of wild-type and mutant strains was isolated and the expression profiles were determined using Affymetrix arrays. Comparisons between the sample groups allow the identification of genes regulated by H3 K4,36,79R mutant. Cells were grown in galactose media and then shifted to glucose media for 6 hours to give the 6 hour time point. Experiment Overall Design: Histone H3 K4,36,79R time course. Cells were grown in galactose media and then shifted to glucose media, which repressed the expression of wild-type histone H3, leaving the histone H3 K4,36,79R mutant as the sole source of histone H3 protein in the cell. Total RNA was isolated from replicate cultures of wild-type and mutant histone H3 at various time points after the shift to glucose media (0, 6, and 9 hours). Expression profiles were determined using Affymetrix arrays. Comparisons between the sample groups allow the identification of genes regulated by H3 K4,36,79R mutant.

INSTRUMENT(S): 418 [Affymetrix]

ORGANISM(S): Saccharomyces cerevisiae  

SUBMITTER: John J. Wyrick  

PROVIDER: E-GEOD-6327 | ArrayExpress | 2008-06-14

SECONDARY ACCESSION(S): GSE6327PRJNA105009

REPOSITORIES: GEO, ArrayExpress

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