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Rapid functional annotation of native enhancers in embryonic stem cells with a Neisseria meningitidis CRISPR-Cas9 system (BeadChip)

ABSTRACT: Gene regulatory elements such as enhancers have profound effects on cellular function, health, and disease. Our understanding of mammalian enhancer function is limited by the lack of a technology that would allow for a rapid and thorough test of their cell type-specific function. Here, we describe a novel Cas9-effector system that enables rapid testing and functional annotation of native enhancers in embryonic stem cells. Total RNA obtained from R26 dCas9-effector mESC lines after viral delivery of sgRNAs directed against proximal promoter or enhancer regions

ORGANISM(S): Mus musculus

SUBMITTER: Barbara Tabak Rene Maehr

PROVIDER: E-GEOD-64057 | ArrayExpress | 2015-03-03

SECONDARY ACCESSION(S): GSE64057PRJNA269981

REPOSITORIES: GEO, ArrayExpress

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