Transcriptomics

Dataset Information

3

Urban waterways microbial communities (Affymetrix)


ABSTRACT: The increased urban pressures are often associated with specialization of microbial communities. Microbial communities being a critical player in the geochemical processes, makes it important to identify key environmental parameters that influence the community structure and its function.In this proect we study the influence of land use type and environmental parameters on the structure and function of microbial communities. The present study was conducted in an urban catchment, where the metal and pollutants levels are under allowable limits. The overall goal of this study is to understand the role of engineered physicochemical environment on the structure and function of microbial communities in urban storm-water canals. Microbial community structure was determined using PhyoChio (G3) Water and sediment samples were collected after a rain event from Sungei Ulu Pandan watershed of >25km2, which has two major land use types: Residential and industrial. Samples were analyzed for physicochemical variables and microbial community structure and composition. Microbial community structure was determined using PhyoChio (G3)

ORGANISM(S): mixed sample  

SUBMITTER: Zhili He   Staffan Kjelleberg  Shivshankar Umashankar  Jizhong Zhou  Nyi N Naing  Lauren Tom  Umid M Joshi  Han Ping  Shailendra Mishra  Gary Andersen  Gourvendu Saxena  Suparna Mitra  Sanjay Swarup  Yuting Liang  Sheela Reuben  Ezequiel M Marzinelli  Kalyan C Mynampati 

PROVIDER: E-GEOD-64368 | ArrayExpress | 2014-12-22

SECONDARY ACCESSION(S): GSE64368PRJNA270850

REPOSITORIES: GEO, ArrayExpress

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