Transcriptomics

Dataset Information

299

Extra-coding RNAs regulate neuronal DNA methylation and long-term memory formation [RNA-seq]


ABSTRACT: This dataset contains whole-genome RNA sequencing results from cortical neuronal cultures and serves as the basis for characterization of extra-coding RNA species from neuronal systems. This experiment contains six biological samples, each of which underwent PolyA+ and PolyA- RNA-seq. Samples were either unstimulated (i.e., treated with media alone; samples V1 and V2), stimulated with 25mM potassium chloride for 1hr (K1, K2) or inactivated with tetrodotoxin for 1hr (T1, T2). Datasets were obtained using RNA-seq from PolyA+ fractions or PolyA- fractions of RNA. PolyA- fractions are denoted "ec". Thus, 12 samples are listed here due to the difference in RNA library preparation.

ORGANISM(S): Rattus norvegicus  

SUBMITTER: Esther Song   Mary K Osborn  Nancy Gallus  Jeremy J Day  Jeremy Jason Day  J D Sweatt  Katherine E Savell  John J O'Malley  Rhiana Simon  Jordan Brown 

PROVIDER: E-GEOD-64902 | ArrayExpress | 2016-05-31

SECONDARY ACCESSION(S): SRP052044GSE64902PRJNA272446

REPOSITORIES: GEO, ArrayExpress, ENA

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