Genomics

Dataset Information

298

H3K4me3 chromatin profiling in SUMOylation-competent and -deficient bone marrow derived dendritic cells unstimulated or stimulated with LPS


ABSTRACT: Purpose: To determine H3K4me3 chromatin profile in UBC9WT and UBC9KO BMDC before and after LPS stimulation. Methods: H3K4me3 chromatin profile was determined by sequencing UBC9 WT and UBC9 KO BMDC chromatin immunoprecipitated with antibody specific for H3K4me3. Results: We show differential chromatin profile for H3K4me3 on the ifnb1 locus between UBC9 KO cells and UBC9 WT. Conclusions: Loss of SUMOylation causes a deregulation of ifnb1 transcription activation mark. A study of H3K4me3 chromatin profile in UBC9 WT and UBC9 KO Bone Marrow derived Dendritic Cells.

ORGANISM(S): Mus musculus  

SUBMITTER: Ido Amit   Pierre Lapaquette  Olivier Joffre  Sebastian Amigorena  Anne Dejean  Ronnie Blecher-Gonen  Jacob S Seeler  Joao G Magalhaes  Matthew L Albert  Jack-Christophe Cossec  Adrien Decque  Pierre-Emmanuel Joubert 

PROVIDER: E-GEOD-66338 | ArrayExpress | 2015-12-14

SECONDARY ACCESSION(S): GSE66338SRP055554PRJNA276565

REPOSITORIES: GEO, ArrayExpress, ENA

Similar Datasets

| GSE66338 | GEO
2015-12-14 | E-GEOD-66315 | ArrayExpress
2018-11-09 | E-MTAB-7290 | ArrayExpress
2016-03-23 | E-GEOD-67211 | ArrayExpress
2014-12-22 | E-GEOD-45174 | ArrayExpress
2015-07-07 | E-GEOD-61677 | ArrayExpress
2013-07-24 | E-GEOD-42211 | ArrayExpress
2015-12-14 | E-GEOD-66178 | ArrayExpress
2015-12-14 | E-GEOD-68952 | ArrayExpress
2016-07-17 | E-GEOD-71128 | ArrayExpress