Genomics

Dataset Information

298

Methylation Profile of dry seed from Arabidopsis ddcc mutant


ABSTRACT: The role of on-CG methylation in seed development and dormancy remains unknown. There are four genes in charge of non-CG methylation in Arabidopsis: drm1, drm2, cmt2 and cmt3. The majority of non-CG methylation in vegetative tissues, leaf, is gone in homozygous ddcc mutant line (Hume et al., 2014). To uncover the possible role of non-CG DNA methylation in seed development and dormancy, we characterized the methylome of ddcc mutant in Arabidopsis dry seed using Illumina sequencing. Meanwhile, vegetative tissue, leaves from 3 week plant with ddcc mutant and from wild type, and dry seed from wild type plant were used as control. Illumina sequencing of bisulfite-converted genomic DNA from dry seed and 3-week-plant leaves of ddcc mutant and wild type.

ORGANISM(S): Arabidopsis thaliana  

SUBMITTER: Robert B Goldberg   Bob Goldberg  Min Chen  Jer-Young Lin 

PROVIDER: E-GEOD-68131 | ArrayExpress | 2015-04-22

SECONDARY ACCESSION(S): SRP057531GSE68131PRJNA281884

REPOSITORIES: GEO, ArrayExpress, ENA

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