Genomics

Dataset Information

5

Methylation Changes in Arabidopsis seed development


ABSTRACT: There are four major seed developmental phases in Arabidopsis seed development: morphogenesis, maturation, dormancy and germination. What methylation changes occurring in the different phases, if any, remains unknown. To uncover the possible role of DNA methylation in different parts of the seed, we characterized the methylome of four major seed developmental phases of Arabidopsis using Illumina sequencing: global stage (glob) and linear cotyledon stage (lcot) for morphogenesis phase; mature green stage (mg) and post mature green stage (pmg) for maturation phase; dry seed (dry) for dormancy phase; leaves (leaf) from 4 week plant for vegetative tissues. Illumina sequencing of bisulfite-converted genomic DNA from six seed developmental stages in Arabidopsis: global stage (glob), linear cotyledon stage (lcot), mature green stage (mg), post mature green stage (pmg), dry seed (dry) and leaves (leaf) from 4 week plant.

ORGANISM(S): Arabidopsis thaliana  

TISSUE(S): Leaves, Seed

SUBMITTER: Bob Goldberg   Robert B Goldberg  Min Chen  Jer-Young Lin 

PROVIDER: E-GEOD-68132 | ArrayExpress | 2015-04-22

SECONDARY ACCESSION(S): SRP057533GSE68132PRJNA281872

REPOSITORIES: GEO, ArrayExpress, ENA

Dataset's files

Source:
Action DRS
E-GEOD-68132.idf.txt Idf
E-GEOD-68132.processed.1.zip Processed
E-GEOD-68132.processed.2.zip Processed
E-GEOD-68132.processed.3.zip Processed
E-GEOD-68132.processed.4.zip Processed
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