Transcriptomics

Dataset Information

1

Host transcriptional reprogramming in response to the rice bacterial blight pathogen Xanthomonas oryzae pv. oryzae strain BLS354


ABSTRACT: We performed RNA-Seq of leaves of Oryza sativa L. ssp. japonica cv. Nipponbare 48 hours after inoculation with Xanthomonas oryzae pv. oryzicola strain BLS354, the causal agent of bacterial leaf streak. Results provide insight into the molecular basis of bacterial leaf streak, particularly the role of transcription activator-like effectors in the disease. Examination of mRNA levels in Oryza sativa L. ssp. japonica cv. Nipponbare leaves at 48 hours after inoculation with Xanthomonas oryzae pv. oryzicola strain BLS354 with three biological replicates compared to three replicates of mock inoculated O. sativa as the control.

ORGANISM(S): Oryza sativa Japonica Group  

SUBMITTER: Andres Cernadas   Adam Bogdanove  Li Wang  Adam J Bogdanove  Aaron W Hummel  Katherine E Wilkins 

PROVIDER: E-GEOD-75131 | ArrayExpress | 2016-07-07

SECONDARY ACCESSION(S): SRP066357GSE75131PRJNA302604

REPOSITORIES: GEO, ArrayExpress, ENA

Dataset's files

Source:
Action DRS
E-GEOD-75131.idf.txt Idf
E-GEOD-75131.processed.1.zip Processed
E-GEOD-75131.sdrf.txt Txt
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