Transcriptomics

Dataset Information

303

Transcriptome profiling of post-mature green seeds from Arabidopsis ddcc mutant and wild-type


ABSTRACT: The role of on-CG methylation in seed development and dormancy remains unknown. There are four genes in charge of non-CG methylation in Arabidopsis: drm1, drm2, cmt2 and cmt3. The majority of non-CG methylation in vegetative tissues, leaf, is gone in homozygous ddcc mutant line (Hume et al., 2014). To uncover the possible role of non-CG DNA methylation in seed development and dormancy, we characterized the transcriptome of ddcc mutant in Arabidopsis post-mature green seeds using Illumina sequencing. Meanwhile, post-mature green seeds from wild type were used as control. Illumina sequencing of transcripts from post-mature green seeds of ddcc mutant and wild type. Two biological replicates were collected.

ORGANISM(S): Arabidopsis thaliana  

SUBMITTER: Robert B Goldberg   Bob Goldberg  Min Chen  Jer-Young Lin 

PROVIDER: E-GEOD-76447 | ArrayExpress | 2016-07-03

SECONDARY ACCESSION(S): GSE76447SRP067963PRJNA307336

REPOSITORIES: GEO, ArrayExpress, ENA

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