Transcriptomics

Dataset Information

307

RNA-seq transcriptonal profiling in partial hepatectomy liver tissues in Arid1a WT and liver specific KO mice.


ABSTRACT: Arid1a is the subunit of SWI/SNF complex, which was reported to guide SWI/SNF to DNA. Here, we found that loss of Arid1a in the liver results in improved liver regeneration after partial hepatectomy.Genome-wide analysis showed that after hepatectomy,loss of Arid1a reduces the recruitment and activity of E2F4 on target promoters, resulting in expression programs that favor regeneration during injury.RNAseq shows transcriptional profiling in WT and Arid1a LKO livers pre- and post-hepatectomy, which confirmed the E2F4 target genes and cell cycle genes were upregulated after hepatectomy. After partial hepatectomy, liver transcriptional profiling in WT and Arid1a liver specific KO mice were generated by RNA-seq analysis.

ORGANISM(S): Mus musculus  

SUBMITTER: Xuxu Sun   Chao Xing  Hanquan Liang  Mohammed Kanchwala  Hao Zhu 

PROVIDER: E-GEOD-76926 | ArrayExpress | 2016-03-30

SECONDARY ACCESSION(S): GSE76926SRP068517PRJNA308950

REPOSITORIES: GEO, ArrayExpress, ENA

Similar Datasets

2016-03-30 | E-GEOD-76927 | ArrayExpress
2016-03-30 | E-GEOD-65167 | ArrayExpress
| GSE65167 | GEO
2014-02-05 | E-GEOD-54673 | ArrayExpress
2010-12-18 | GSE26138 | GEO
| GSE71510 | GEO
2010-12-18 | E-GEOD-26138 | ArrayExpress
| GSE71513 | GEO
| GSE71512 | GEO
| GSE71511 | GEO