Transcriptomics

Dataset Information

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Light and BcLTF2-dependent gene expression profiles in the phytopathogenic fungus Botrytis cinerea


ABSTRACT: Full transcriptomes of the Botrytis cinerea wild-type strain B0510 and the null-mutant deltaBcLTF2, cultured in continuous darkness or submitted to a light stimulation, were compared to identify light- or/and BcLTF2-dependent genes. The Botrytis cinerea wild-type strain and the null-mutant deltaBcLTF2 were cultured for 54h in continuous darkness ; then, cultures were exposed for 60 min to light before harvest (L) or were harvested after additional 60 min darkness (D). 4 replicates were performed. The 12 total-RNA samples (4 conditions* 3 replicates) were used for hybridization on NimbleGen 4plex gene expression arrays (20,885 gene models from Botrytis cinerea with three 60-mer probes per gene).

ORGANISM(S): Botrytis cinerea B05.10  

SUBMITTER: Kim C Cohrs   Muriel Viaud  Adeline Simon  Adeline SIMON  Julia Schumacher 

PROVIDER: E-GEOD-79679 | ArrayExpress | 2016-06-01

SECONDARY ACCESSION(S): GSE79679PRJNA316699

REPOSITORIES: GEO, ArrayExpress

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