Transcriptomics

Dataset Information

3

Transcription profiling of faecal flora from healthy individuals and a patient with ulcerative colitis during disease and remission states


ABSTRACT: Comparison of faecal flora of three healthy individuals and a patient suffering from Ulcerative Colitis during disease and remission states. Faecal samples were taken and frozen at -80 within one hour.

INSTRUMENT(S): Axon- GenePix4000B

ORGANISM(S): unidentified  

SUBMITTER: Carl Harrington  

PROVIDER: E-MEXP-1395 | ArrayExpress | 2008-07-18

REPOSITORIES: ArrayExpress

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Publications

A short-oligonucleotide microarray that allows improved detection of gastrointestinal tract microbial communities.

Harrington Carl R CR   Lucchini Sacha S   Ridgway Karyn P KP   Wegmann Udo U   Eaton Tracy J TJ   Hinton Jay C D JC   Gasson Michael J MJ   Narbad Arjan A  

BMC Microbiology 20081111


The human gastrointestinal (GI) tract contains a diverse collection of bacteria, most of which are unculturable by conventional microbiological methods. Increasingly molecular profiling techniques are being employed to examine this complex microbial community. The purpose of this study was to develop a microarray technique based on 16S ribosomal gene sequences for rapidly monitoring the microbial population of the GI tract.We have developed a culture-independent, semi-quantitative, rapid method  ...[more]

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