Transcriptomics

Dataset Information

37

Transcription profiling of potato tubers for the investigation of methionine content


ABSTRACT: BSA pooling experiment for methionine content in a segrating diploid potato population (CxE). RNA of constrasting individuals for methionine content are pooled together based on their tuber methionine content and marker association with either or both of the identified QTLs for methionine content

ORGANISM(S): Solanum tuberosum  

SUBMITTER: Bjorn Kloosterman  

PROVIDER: E-MEXP-2441 | ArrayExpress | 2009-11-20

REPOSITORIES: ArrayExpress

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Publications

From QTL to candidate gene: genetical genomics of simple and complex traits in potato using a pooling strategy.

Kloosterman Bjorn B   Oortwijn Marian M   uitdeWilligen Jan J   America Twan T   de Vos Ric R   Visser Richard G F RG   Bachem Christian W B CW  

BMC genomics 20100308


BACKGROUND: Utilization of the natural genetic variation in traditional breeding programs remains a major challenge in crop plants. The identification of candidate genes underlying, or associated with, phenotypic trait QTLs is desired for effective marker assisted breeding. With the advent of high throughput -omics technologies, screening of entire populations for association of gene expression with targeted traits is becoming feasible but remains costly. Here we present the identification of no  ...[more]

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