Transcriptomics

Dataset Information

3

Transcription profiling by array of two day cold treated rice plants (Oryza sativa L. cv. Nipponbare)


ABSTRACT: Rice plants (Oryza sativa L. cv. Nipponbare) were grown in plastic pots filled with nutrient soil for 2 weeks under flooded lowland conditions with a 12-h light (28C)/12-h dark (25C) regimen (ca. 1500 umol photons m2 s1). The plants were cold treated by transfer from 28C to 10C with growth for 2 days.

SUBMITTER: Kyonoshin Maruyama  

PROVIDER: E-MEXP-3863 | ArrayExpress | 2014-03-03

REPOSITORIES: ArrayExpress

altmetric image

Publications

Integrated analysis of the effects of cold and dehydration on rice metabolites, phytohormones, and gene transcripts.

Maruyama Kyonoshin K   Urano Kaoru K   Yoshiwara Kyouko K   Morishita Yoshihiko Y   Sakurai Nozomu N   Suzuki Hideyuki H   Kojima Mikiko M   Sakakibara Hitoshi H   Shibata Daisuke D   Saito Kazuki K   Shinozaki Kazuo K   Yamaguchi-Shinozaki Kazuko K  

Plant physiology 20140210 4


Correlations between gene expression and metabolite/phytohormone levels under abiotic stress conditions have been reported for Arabidopsis (Arabidopsis thaliana). However, little is known about these correlations in rice (Oryza sativa 'Nipponbare'), despite its importance as a model monocot. We performed an integrated analysis to clarify the relationships among cold- and dehydration-responsive metabolites, phytohormones, and gene transcription in rice. An integrated analysis of metabolites and g  ...[more]

Similar Datasets

2014-02-25 | E-MEXP-3853 | ArrayExpress
2014-03-03 | E-MEXP-3862 | ArrayExpress
2014-03-03 | E-MEXP-3865 | ArrayExpress
2014-03-03 | E-MEXP-3864 | ArrayExpress
2014-02-25 | E-MEXP-3854 | ArrayExpress
2013-08-05 | E-MEXP-3700 | ArrayExpress
2013-08-05 | E-MEXP-3701 | ArrayExpress
2011-01-06 | E-MEXP-2529 | ArrayExpress
2011-08-01 | E-MEXP-3172 | ArrayExpress
2011-05-20 | E-MEXP-2725 | ArrayExpress