Transcriptomics

Dataset Information

4

Transcription profiling by array of Arabidopsis thaliana L. ecotype-Columbia exposed to cold treatment


ABSTRACT: Wild-type A. thaliana plants (Arabidopsis thaliana L. ecotype-Columbia) were grown in plastic pots filled with peat moss for 3 weeks (principal growth stage 1.071.08) under a 16 h light/8 h dark regimen (40 ± 10 umol photons/m2/s) at 22C. Cold treatment: The 3-week-old plants were transferred from 22C to 4C and were grown for 1 day.

ORGANISM(S): Arabidopsis thaliana  

SUBMITTER: Kyonoshin Maruyama  

PROVIDER: E-MEXP-4000 | ArrayExpress | 2014-03-03

REPOSITORIES: ArrayExpress

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Publications

Integrated analysis of the effects of cold and dehydration on rice metabolites, phytohormones, and gene transcripts.

Maruyama Kyonoshin K   Urano Kaoru K   Yoshiwara Kyouko K   Morishita Yoshihiko Y   Sakurai Nozomu N   Suzuki Hideyuki H   Kojima Mikiko M   Sakakibara Hitoshi H   Shibata Daisuke D   Saito Kazuki K   Shinozaki Kazuo K   Yamaguchi-Shinozaki Kazuko K  

Plant physiology 20140210 4


Correlations between gene expression and metabolite/phytohormone levels under abiotic stress conditions have been reported for Arabidopsis (Arabidopsis thaliana). However, little is known about these correlations in rice (Oryza sativa 'Nipponbare'), despite its importance as a model monocot. We performed an integrated analysis to clarify the relationships among cold- and dehydration-responsive metabolites, phytohormones, and gene transcription in rice. An integrated analysis of metabolites and g  ...[more]

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