Transcriptomics

Dataset Information

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Transcription profiling of yeast cells (homozygous deletion mutants of BY4743) grown in chemostats, sampled at steady state. Glucose and ammonium limitation, dilution rates 0.1 and 0.2 hr-1, gene deletions HO and HAP4 applied


ABSTRACT: S. cerevisiae cells (homozygous deletion mutants of BY4743) grown in chemostats, sampled at steady state. Glucose and ammonium limitation, dilution rates 0.1 and 0.2 hr-1, gene deletions HO and HAP4 applied.

INSTRUMENT(S): 418 [Affymetrix]

ORGANISM(S): Saccharomyces cerevisiae  

SUBMITTER: Pinar Pir  

PROVIDER: E-MEXP-442 | ArrayExpress | 2005-12-31

REPOSITORIES: ArrayExpress

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Publications

Integrative investigation of metabolic and transcriptomic data.

Pir Pinar P   Kirdar Betül B   Hayes Andrew A   Onsan Z Ylsen ZY   Ulgen Kutlu O KO   Oliver Stephen G SG  

BMC bioinformatics 20060412


New analysis methods are being developed to integrate data from transcriptome, proteome, interactome, metabolome, and other investigative approaches. At the same time, existing methods are being modified to serve the objectives of systems biology and permit the interpretation of the huge datasets currently being generated by high-throughput methods.Transcriptomic and metabolic data from chemostat fermentors were collected with the aim of investigating the relationship between these two data sets  ...[more]

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