Transcriptomics

Dataset Information

0

Genomic expression over batch growth of mupirocin producing strain Pseudomonas synxantha NCIMB10586


ABSTRACT: The Pseudomonas synxantha strain NCIMB10586 produces the antibiotic mupirocin / Pseudomonic acid A from a 75 kb gene cluster; expression of this is regulated through quorum-sensing. We wished to examine expression of the strain during batch growth, in particular of the mupirocin cluster and any other operons regulated in a similar manner. We took samples from three independent cultures at 7 time-points - sampling every 2 hours from 6 to 18 hours.

INSTRUMENT(S): Illumina HiSeq 4000

ORGANISM(S): Pseudomonas synxantha  

SUBMITTER: Christopher M Thomas   Anthony S Haines  

PROVIDER: E-MTAB-10255 | ArrayExpress | 2021-06-04

SECONDARY ACCESSION(S): ERP127828

REPOSITORIES: ArrayExpress, ENA

Dataset's files

Source:
Action DRS
E-MTAB-10255.idf.txt Idf
E-MTAB-10255.idf.txt_original Idf
E-MTAB-10255.processed.1.zip Processed
E-MTAB-10255.processed.2.zip Processed
E-MTAB-10255.sdrf.txt Txt
Items per page:
1 - 5 of 5

Similar Datasets

2010-04-09 | E-GEOD-21152 | ArrayExpress
2018-10-05 | E-MTAB-6268 | ArrayExpress
2014-08-04 | E-GEOD-54855 | ArrayExpress
2015-05-01 | E-GEOD-64501 | ArrayExpress
2020-09-14 | E-MTAB-8560 | ArrayExpress
2012-06-18 | E-GEOD-28617 | ArrayExpress
2013-10-01 | E-GEOD-48256 | ArrayExpress
2014-11-03 | E-GEOD-53420 | ArrayExpress
2012-08-31 | E-GEOD-39977 | ArrayExpress
2010-01-26 | E-GEOD-19960 | ArrayExpress