Transcriptomics

Dataset Information

300

Transcriptomics of Burkholderia contaminans sequential isolates


ABSTRACT: RNA-Seq data encompass transcriptomes from two sequential isolates of B. contaminans ST872. Each isolate was cultivated in three conditions (serum, sputum and BSM medium) in three biological replicates.

INSTRUMENT(S): Illumina MiSeq

ORGANISM(S): Burkholderia contaminans  

SUBMITTER: Jaroslav Nunvar  

PROVIDER: E-MTAB-4645 | ArrayExpress | 2016-05-05

SECONDARY ACCESSION(S): ERP015280

REPOSITORIES: ArrayExpress, ENA

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Publications

Understanding the Pathogenicity of Burkholderia contaminans, an Emerging Pathogen in Cystic Fibrosis.

Nunvar Jaroslav J   Kalferstova Lucie L   Bloodworth Ruhi A M RA   Kolar Michal M   Degrossi Jose J   Lubovich Silvina S   Cardona Silvia T ST   Drevinek Pavel P  

PloS one 20160811 8


Several bacterial species from the Burkholderia cepacia complex (Bcc) are feared opportunistic pathogens that lead to debilitating lung infections with a high risk of developing fatal septicemia in cystic fibrosis (CF) patients. However, the pathogenic potential of other Bcc species is yet unknown. To elucidate clinical relevance of Burkholderia contaminans, a species frequently isolated from CF respiratory samples in Ibero-American countries, we aimed to identify its key virulence factors possi  ...[more]

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