Transcriptomics

Dataset Information

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Gene expression profiling of bronchoalveolar lavage cells preceding a clinical diagnosis of chronic lung allograft dysfunction


ABSTRACT: Chronic Lung Allograft Dysfunction (CLAD) is the main limitation to long-term survival after lung transplantation. Although CLAD is usually not responsive to treatment, earlier identification may improve treatment prospects. In a nested case control study, 1-year post transplant surveillance bronchoalveolar lavage (BAL) fluid samples were obtained from incipient CLAD (n=9) and CLAD free (n=8) lung transplant recipients. Incipient CLAD cases were diagnosed with CLAD within 2 years, while controls were free from CLAD for at least 4 years following bronchoscopy. Transcription profiles in the BAL cell pellets were assayed with the HG-U133 Plus 2.0 microarray (Affymetrix). Differential gene expression analysis was performed to identify a candidate list of differentially expressed probe sets.

ORGANISM(S): Homo sapiens  

DISEASE(S): Chronic Lung Allograft Dysfunction,Normal

SUBMITTER: Xiaoyan Wang   Samuel S Weigt  

PROVIDER: E-MTAB-5029 | ArrayExpress | 2017-01-04

REPOSITORIES: ArrayExpress

Dataset's files

Source:
Action DRS
E-MTAB-5029.idf.txt Idf
E-MTAB-5029.idf.txt_original Idf
E-MTAB-5029.processed.1.zip Processed
E-MTAB-5029.raw.1.zip Raw
E-MTAB-5029.sdrf.txt Txt
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