Transcriptomics

Dataset Information

6

RNA-seq of Triticum aestivum cultivars Fang-60; Banks and Gregory grown under heat stress during grain filling compared to non-stressed controls 14 and 30 days post anthesis


ABSTRACT: Heat stress is one of the major abiotic stress factor that affects wheat yield. Especially, heat stress during grain filling affects grain yield besides reduced grain quality. So, in our present study, three genotypes with varied levels of tolerance to heat stress were chosen. They were subjected to heat stress at two stages for three days viz., early (11-14days-post-anthesis) and late (27-30dpa) grain filling independently under controlled conditions. At 14 and 30dpa, the spikes were harvested from control and stress conditions from all the three genotypes, grains were isolated and pulverized. Hence pulverized tissues are used for RNA extraction and further for transcriptome sequencing using HiSeq 4000. Data were analyzed to identify the genes involved in imparting heat stress tolerance.

INSTRUMENT(S): Illumina HiSeq 4000

ORGANISM(S): Triticum Aestivum

SUBMITTER: Parimalan Rangan  

PROVIDER: E-MTAB-6140 | ArrayExpress | 2019-12-16

SECONDARY ACCESSION(S): ERP104851

REPOSITORIES: ArrayExpress, ENA

Dataset's files

Source:
Action DRS
E-MTAB-6140.idf.txt Idf
E-MTAB-6140.idf.txt_original Idf
E-MTAB-6140.sdrf.txt Txt
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