Transcriptomics

Dataset Information

3

Beta-glucan is a major growth substrate for human gut bacteria related to Coprococcus eutactus


ABSTRACT: The gut bacterium Coprococcus sp. ART55/1 has been found to encode two genes containing glycoside hydrolase family 9 (GH9) catalytic domains. These genes are hypothesised to impact upon the ability of this bacteria to utilise different carbon sources. To further investigate the role of these genes, as well as the wider transcriptome, Coprococcus sp. ART55/1 was grown on five different carbon sources - beta-glucan, lichenan, cellobiose, glucose and glucomannan - and the transcriptional response was investigated using RNA sequencing.

INSTRUMENT(S): NextSeq 500

ORGANISM(S): Coprococcus sp. ART55/1  

SUBMITTER: Victoria Gray   Sophie Shaw   Petra Louis  

PROVIDER: E-MTAB-8048 | ArrayExpress | 2020-03-09

SECONDARY ACCESSION(S): ERP115721

REPOSITORIES: ArrayExpress, ENA

Dataset's files

Source:
Action DRS
E-MTAB-8048.idf.txt Idf
E-MTAB-8048.idf.txt_original Idf
E-MTAB-8048.processed.1.zip Processed
E-MTAB-8048.sdrf.txt Txt
Items per page:
1 - 4 of 4

Similar Datasets

2021-04-18 | E-MTAB-10136 | ArrayExpress
2020-03-10 | PXD014174 | Pride
2019-02-26 | GSE101494 | GEO
2011-01-01 | S-EPMC3209869 | BioStudies
2016-03-25 | E-GEOD-79497 | ArrayExpress
2013-01-01 | S-EPMC3792092 | BioStudies
2020-09-01 | E-MTAB-8432 | ArrayExpress
2005-01-01 | S-EPMC546758 | BioStudies
2022-02-17 | PXD026056 | Pride
1000-01-01 | S-EPMC4909020 | BioStudies