Transcriptomics

Dataset Information

0

Comparative transcriptome analysis provides molecular insights into the interaction of Beet necrotic yellow vein virus and Beet soil-borne mosaic virus with their host sugar beet


ABSTRACT: Beet necrotic yellow vein virus (BNYVV) and Beet soil-borne mosaic virus (BSBMV) belong to the genus Benyvirus. Both viruses share a similar genome organization, but disease development induced in their major host plant sugar beet displays striking differences. BNYVV induces excessive lateral root (LR) formation by hijacking auxin-regulated pathways; whereas BSBMV infected roots appear asymptomatic. To elucidate transcriptomic changes associated with the virus-specific disease development of BNYVV and BSBMV, we performed a comparative transcriptome analysis of a virus infected susceptible sugar beet genotype.

INSTRUMENT(S): Illumina HiSeq 1500

ORGANISM(S): Beta vulgaris  

SUBMITTER: Daniel Wibberg  

PROVIDER: E-MTAB-8187 | ArrayExpress | 2019-11-06

SECONDARY ACCESSION(S): ERP116485

REPOSITORIES: ArrayExpress, ENA

Similar Datasets

2018-03-01 | E-ENAD-2 | ArrayExpress
2007-12-08 | E-MEXP-404 | ArrayExpress
2013-01-17 | E-GEOD-43584 | ArrayExpress
| GSE92859 | GEO
2018-10-26 | PXD005563 | Pride
2016-09-06 | E-GEOD-81664 | ArrayExpress
| GSE56413 | GEO
2014-10-20 | E-GEOD-56974 | ArrayExpress
2008-06-13 | E-MEXP-1626 | ArrayExpress
| GSE55951 | GEO