Transcriptomics

Dataset Information

0

Identifying crossover locations in Arabidopsis thaliana wild type and asy1 Col-0 × Ws-4 F2 populations using genotyping-by-sequencing


ABSTRACT: Genomic DNA from 187 wild type and 169 asy1 Col-0 x Ws-4 F2 individuals was extracted using CTAB and used to generate sequencing libraries as described (Lawrence et al, 2019 Current Biology). Sequencing data was analysed to identify crossovers using the TIGER pipeline as previously described (Rowan et al, 2015 G3 (Bethesda); Yelina et al, 2015 Genes & Dev; Lawrence et al, 2019 Current Biology).

INSTRUMENT(S): NextSeq 500

ORGANISM(S): Arabidopsis thaliana  

SUBMITTER: Christophe Lambing  

PROVIDER: E-MTAB-8715 | ArrayExpress | 2020-05-18

SECONDARY ACCESSION(S): ERP119564

REPOSITORIES: ArrayExpress, ENA

Similar Datasets

2020-05-18 | E-MTAB-8725 | ArrayExpress
2010-07-06 | E-GEOD-20501 | ArrayExpress
2015-10-22 | E-MEXP-2510 | ExpressionAtlas
2010-01-06 | E-MEXP-2510 | ArrayExpress
| PRJNA285709 | ENA
2020-07-06 | PXD019677 | Pride
2019-10-31 | E-MTAB-8318 | ArrayExpress
| PRJEB7907 | ENA
2020-09-02 | E-MTAB-9369 | ArrayExpress
2020-09-02 | E-MTAB-9370 | ArrayExpress