Transcriptomics

Dataset Information

8

High accuracy gene expression profiling of sorted cell subpopulations from breast cancer PDX model tissue


ABSTRACT: Data sets from 2 experiments using PDX derived human TNBC tissue to compare gene expression between cell subpopulations with distinct marker profiles. The first experiment describes comparison of CD184hi vs. CD184lo population, the second experiment (with a different mouse model) compares CD49f lo vs. CD49fhi as well as CD133lo vs. CD133hi. Each subpopulation shows distinct expression patterns suggestive of distinct function within breast cancer tissue.

INSTRUMENT(S): Illumina HiSeq 2000

ORGANISM(S): Homo sapiens  

DISEASE(S): Triple Negative Breast Cancer

SUBMITTER: Frances Tong   Warren Porter   Rainer Blaesius  

PROVIDER: E-MTAB-9428 | ArrayExpress | 2020-08-20

SECONDARY ACCESSION(S): ERP123359

REPOSITORIES: ArrayExpress, ENA

Dataset's files

Source:
Action DRS
E-MTAB-9428.idf.txt Idf
E-MTAB-9428.idf.txt_original Idf
E-MTAB-9428.processed.1.zip Processed
E-MTAB-9428.processed.2.zip Processed
E-MTAB-9428.sdrf.txt Txt
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