Transcriptomics

Dataset Information

6

Methylation profiling of human first and thrid trimester placenta and whole blood


ABSTRACT: Fifteen DNA methylation array experiments were performed on five human chromosome specific array platforms (NimbleGen: HG18_CHR13_FT, HG18_CHR18_FT, HG18_CHR21_FT, HG18_CHRX_FT, HG18_CHRY_FT), comparing: (1) one female whole blood immunoprecipitated DNA fragments to their input DNA, (2) one 1st trimester normal placenta immunoprecipitated DNA fragments to their input DNA and (3) one 3rd trimester normal placenta immunoprecipitated DNA fragments to their input DNA.

ORGANISM(S): Homo sapiens  

TISSUE(S): Placenta, Whole Blood

SUBMITTER: Stephen Clayton  

PROVIDER: E-TABM-507 | ArrayExpress | 2009-05-01

REPOSITORIES: ArrayExpress

altmetric image

Publications

Sites of differential DNA methylation between placenta and peripheral blood: molecular markers for noninvasive prenatal diagnosis of aneuploidies.

Papageorgiou Elisavet A EA   Fiegler Heike H   Rakyan Vardhman V   Beck Stephan S   Hulten Maj M   Lamnissou Klea K   Carter Nigel P NP   Patsalis Philippos C PC  

The American journal of pathology 20090406 5


The use of epigenetic differences between maternal whole blood and fetal (placental) DNA is one of the main areas of interest for the development of noninvasive prenatal diagnosis of aneuploidies. However, the lack of detailed chromosome-wide identification of differentially methylated sites has limited the application of this approach. In this study, we describe an analysis of chromosome-wide methylation status using methylation DNA immunoprecipitation coupled with high-resolution tiling oligon  ...[more]

Similar Datasets

2012-01-02 | E-MTAB-947 | ArrayExpress
2007-09-01 | E-TABM-286 | ArrayExpress
2008-10-02 | E-GEOD-12212 | ArrayExpress
2008-12-11 | E-GEOD-13217 | ArrayExpress
2014-06-20 | E-GEOD-34804 | ArrayExpress
2013-07-01 | E-GEOD-44254 | ArrayExpress
2009-06-12 | E-GEOD-14570 | ArrayExpress
2014-04-10 | E-GEOD-36086 | ArrayExpress
2012-06-14 | E-GEOD-37547 | ArrayExpress
2012-01-01 | E-GEOD-34766 | ArrayExpress