Transcriptomics

Dataset Information

63

Comparative genomic hybridization of Ectocarpus - different strains


ABSTRACT: Comparative Genome Hybridization of Ectocarpus siliculosus strains 371 (freshwater ecotype), 524 (copper-tolerant strain), and 568 (female strain), as well as E. fasciculatus strain 395 against the sequenced genome strain (32).

SUBMITTER: Simon dittami  

PROVIDER: E-TABM-766 | ArrayExpress | 2010-01-01

REPOSITORIES: ArrayExpress

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Publications

Microarray estimation of genomic inter-strain variability in the genus Ectocarpus (Phaeophyceae).

Dittami Simon M SM   Proux Caroline C   Rousvoal Sylvie S   Peters Akira F AF   Cock J Mark JM   Coppée Jean-Yves JY   Boyen Catherine C   Tonon Thierry T  

BMC molecular biology 20110113


BACKGROUND: Brown algae of the genus Ectocarpus exhibit high levels of genetic diversity and variability in morphological and physiological characteristics. With the establishment of E. siliculosus as a model and the availability of a complete genome sequence, it is now of interest to analyze variability among different species, ecotypes, and strains of the genus Ectocarpus both at the genome and the transcriptome level. RESULTS: We used an E. siliculosus gene expression microarray based on EST  ...[more]

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