Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

E-ENAD-3

ABSTRACT: RNA-seq of Prunus persica roots and leaves under drought stress

PROVIDER: E-ENAD-3 | ExpressionAtlas | 2017-12-05

REPOSITORIES: ExpressionAtlas

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	E-ENAD-3-analysis-methods.tsv	Tabular
	E-ENAD-3-analytics.tsv	Tabular
	E-ENAD-3-atlasExperimentSummary.Rdata	Rdata
	E-ENAD-3-configuration.xml	Xml
	E-ENAD-3-g3_g1-mvaPlot.png	Other

Items per page:

1 - 5 of 32

Similar Datasets

E-ENAD-8

Project description:RNA-seq of banana in vitro roots under mild osmotic stress

2018-01-04 | E-ENAD-8 | ExpressionAtlas

E-GEOD-36789

Project description:Transcriptome Profiling of Roots and leaves Under High Osmotic Stress in Arabidopsis

2015-06-01 | E-GEOD-36789 | ExpressionAtlas

E-ENAD-5

Project description:RNA-seq of Arabidopsis lyrata ssp. lyrata leaves under thermal stress to compare gene expression patterns between acclimated and non-acclimated plants

2017-12-05 | E-ENAD-5 | ExpressionAtlas

Absence of major epigenetic and transcriptomic changes accompanying the interspecific cross between peach and almond

Project description:We analysed the DNA methylation and transcription levels of transposable elements and genes in leaves of Prunus persica and Prunus dulcis and in their F1 hybrid using high-throughput sequencing tecnhologies. We can conclude that the merging of the two parental genomes in the P. persica x P. dulcis hybrid does not result in a “genomic shock” with significant changes in the DNA methylation or in the transcription.

2022-08-10 | GSE198152 | GEO

Gene expression analysis in a Brazilian wheat cultivar under drought

Project description:The central part of Brazil, consisting mostly of the Cerrado Biome, is considered to be the new frontier for increasing Brazilian wheat production. However, rainfed wheat production in that area must cope with drought stress. In order to better understand the drought response, we analyzed the mRNA profiling under drought in roots and leaves of the cultivar MGS1 Aliança (a well-adapted cultivar to the Cerrado). We identified 4,422 candidate genes in roots and leaves.

2016-11-29 | GSE81833 | GEO

E-MTAB-5891

Project description:RNA-seq of wheat leaves and roots in response to Xanthomonas translucens infection

2017-10-10 | E-MTAB-5891 | ExpressionAtlas

Early drought-responsive changes in pepper leaves and roots

Project description:Drought is one of the major factor that limits crop production and reduces yield. To understand the early response of plants under nearly natural conditions, pepper plants were grown in a greenhouse and drought stressed by withholding water for one week. Plants adapted to the decreasing water content of the substrate by adjustment of their osmotic potential in roots by accumulation of raffinose, glucose, galactinol and proline. In contrast in leaves levels of fructose, sucrose and also galactinol increased. Due to the water deficit cadaverine, putrescine, spermidine and spermine accumulated in leaves whereas the concentration of polyamines was reduced in roots. These polyamines are suggested to rather act as stress protectants than for osmotic adjustment. To understand the molecular basis of the response to this early drought stress better, four suppression subtractive hybridisation libraries from leaves and roots were constructed. Microarray technique was used to identify differentially expressed genes. A total of 109 unique ESTs were detected. The diversity of the putative functions of all identified genes confirms the complexity of the plant response to drought stress. Keywords: Transcription profiling Two-condition experiment in roots and leaves, control leaves (CL) vs. drought-stressed leaves (DL) and control roots (CR) vs. drought-stressed roots (DR). Biological replicates: 4 control (1-4), drought-stressed (1-4), independently grown and harvested. One swap replicate per array.

2010-06-20 | E-GEOD-18627 | biostudies-arrayexpress

Early drought-responsive changes in pepper leaves and roots

2009-10-28 | GSE18627 | GEO

Project description:RNA-Seq of strawberry leaves under drought stress

| PRJNA733854 | ENA

TOC1 silencing in roots only changes transcriptional responses to drought in Nicotiana attenuata

Project description:Identification of transcripts that change expression in TOC1-silenced Nicotiana attenuata plants leaves and roots under drought

2019-01-08 | GSE124736 | GEO

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

Tweets

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data