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E-GEOD-19978

ABSTRACT: Transcription profiling by array of Arabidopsis after treatment with CLAVATA3/EMBRYO SURROUNDING REGION-related (CLE) peptides

OTHER RELATED OMICS DATASETS IN: PRJNA120131

PROVIDER: E-GEOD-19978 | ExpressionAtlas | 2015-05-18

REPOSITORIES: ExpressionAtlas

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Dataset's files

Source:

			Action	DRS
	E-GEOD-19978-analysis-methods.tsv	Tabular
	E-GEOD-19978-atlasExperimentSummary.Rdata	Rdata
	E-GEOD-19978-configuration.xml	Xml
	E-GEOD-19978-percentile-ranks.tsv	Tabular
	E-GEOD-19978.condensed-sdrf.tsv	Tabular

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1 - 5 of 47

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Different gene expressions in root tips between CLE10 and CLE25 treatment

2010-09-03 | GSE19978 | GEO

Different gene expressions in root tips between CLE10 and CLE25 treatment

Project description:Cell–cell communication is critical for tissue and organ development. In plants, secretory CLAVATA3/EMBRYO SURROUNDING REGION-related (CLE) peptides function as intercellular signaling molecules in various aspects of tissue development. However, little is known about intracellular signaling pathways functioning in vascular development downstream of the CLE ligands. To elucidate CLE signaling pathway, we performed GeneChip analysis. Arabidopsis roots were treated with chemically synthesized CLE10, or CLE25 at 1000 nM for 12 hours. Comparisons between CLE10 and CLE25 treatment will highlight the genes involved in the cause of different effects.

2010-09-03 | E-GEOD-19978 | biostudies-arrayexpress

Expression data from Arabidopsis plants overexpressing CLE３ in roots

Project description:Plant hormones and small secretory peptides often function as environmental stress mediators. Some recent reports indicate that small secretory peptides, such as CLAVATA3/EMBRYO SURROUNDING REGION-RELATED (CLE), also function as mediators of environmental stimuli. CLE３ is induced in roots by defense elicitor treatment. Plants without functional CLE3 showed compromized defense gene responses in shoots when plant roots were treated with NaSA. Here, we identified specific genes downstream of CLE3 in roots and shoots with transformed Arabidopsis plants.

2021-09-01 | GSE176064 | GEO

Expression data from Arabidopsis plants overexpressing CLE2 in roots

Project description:Plant hormones and small secretory peptides often function as environmental stress mediators. Some recent reports indicate that small secretory peptides, such as CLAVATA3/EMBRYO SURROUNDING REGION-RELATED (CLE), also function as mediators of environmental stimuli. CLE2 is induced in roots by light depriviation. Plants without functional CLE2 showed a chlorosis phenotype when grown under shade. Here, we identified specific genes downstream of CLE2 in roots and shoots with transformed Arabidopsis plants.

2020-12-31 | GSE149015 | GEO

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