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E-GEOD-21397

ABSTRACT: Continuous gene expression profile of leaf throughout the entire growth in rice

PROVIDER: E-GEOD-21397 | ExpressionAtlas | 2015-06-26

REPOSITORIES: ExpressionAtlas

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Transcriptomic analysis of rice

Project description:This SuperSeries is composed of the following subset Series: GSE21396: Spatio-temporal gene expression of various tissues/organs throughout entire growth in rice GSE21397: Continuous gene expression profile of leaf throughout the entire growth in rice GSE21398: Comparison of gene expression profile of flag leaf from fertile and sterile lines of rice Refer to individual Series

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Project description:A continuous gene expression profiling of leaves at regular interval from transplanting until harvesting was performed to understand the changes of transcriptional program and physiological state throughout entire growth of the rice plant in 2010. For continuous gene expression profile of leaf, the uppermost fully-expanded leaf in the main stem was sampled at 12:00 PM at regular intervals of 7 days encompassing 17 different growth stages with three replicates during a normal rice growing season in 2010.

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Continuous gene expression profile of leaf throughout the entire growth in rice

Project description:A continuous gene expression profiling of leaves at regular interval from transplanting until harvesting was performed to understand the changes of transcriptional program and physiological state throughout entire growth of the rice plant. For continuous gene expression profile of leaf, the uppermost fully-expanded leaf, 1st leaf before 83 days after transplanting (DAT) and flag leaf from then on, in the main stem was sampled at 12:00 PM at regular intervals of 7 days encompassing 17 different growth stages with three replicates.

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Continuous gene expression profile of leaf at nighttime throughout the entire growth of rice in the field

Project description:A continuous gene expression profiling of leaves was performed during nighttime at regular interval from transplanting until harvesting to understand the changes of transcriptional program and physiological state throughout entire growth of the rice plant under natural field conditions. The uppermost fully-expanded leaf in the main stem corresponding to the 1st leaf until 83 days after transplanting (DAT) and the flag leaf from them on were sampled in two replicates at 12:00 midnight at 7- day intervals encompassing 17 different growth stages. All samples were obtained from rice plants grown in the field during the 2008 cultivation season.

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