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E-GEOD-25134

ABSTRACT: Transcription profiling by array of Arabidopsis mutant for bzr1 and bri1 or bri1 only

OTHER RELATED OMICS DATASETS IN: GSE25135PRJNA142707PRJNA142765PRJNA134589

PROVIDER: E-GEOD-25134 | ExpressionAtlas | 2014-07-03

REPOSITORIES: ExpressionAtlas

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Dataset's files

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			Action	DRS
	E-GEOD-25134-analysis-methods.tsv	Tabular
	E-GEOD-25134-atlasExperimentSummary.Rdata	Rdata
	E-GEOD-25134-configuration.xml	Xml
	E-GEOD-25134-percentile-ranks.tsv	Tabular
	E-GEOD-25134-zoomifications-log.tsv	Tabular

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E-GEOD-25396

Project description:Transcription profiling by array of Arabidopsis overexpressing AtGATA2 or mutant for bri1

2014-07-03 | E-GEOD-25396 | ExpressionAtlas

Expression data from dark-grown BR double mutant bzr1-1D;bri1-116, single mutant bri1-116, and wildtype

Project description:Molecular genetic analyses support a central role of BZR1 in Brassinosteroid (BR) regulation of plant development. The dominant bzr1-1D mutation, which stabilizes the BZR1 protein, completely suppresses the de-etiolated phenotype of the null bri1-116 mutant grown in the dark. Using microarray analysis, we identified genes differentially expressed in bri1-116 compared to wild type and genes differentially expressed in the bzr1-1D;bri1-116 double mutant compared to the bri1-116 single mutant. Consistent with the phenotypic suppression of bri1-116 by bzr1-1D, about 80% of the genes affected in bri1-116 were affected oppositely by bzr1-1D BZR1 regulated genes were generated from comparing genes differentially expressed by bzr1-1D;bri1-116 and bri1-116. Genes affected by BRI1 were generated from comparing differentially expressed genes of bri1-116 and Col control. ANOVA was used to find genes whose expression was different between bzr1-1D;bri1-116 and bri1-116 or between bri1-116 and Col samples [see Supplementary file below].

2010-12-31 | E-GEOD-25134 | biostudies-arrayexpress

Expression data from dark-grown BR double mutant bzr1-1D;bri1-116, single mutant bri1-116, and wildtype

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