Browse
Submit Data
Databases
API
Help

Dataset Information

7 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

E-GEOD-33790

ABSTRACT: The response and recovery of Arabidopsis thaliana transcriptome to phosphate starvation [ATH1-121501]

OTHER RELATED OMICS DATASETS IN: PRJNA156451PRJNA150581PRJNA156439

PROVIDER: E-GEOD-33790 | ExpressionAtlas | 2015-11-27

REPOSITORIES: ExpressionAtlas

ACCESS DATA

Json Xml

Similar Datasets

The response and recovery of Arabidopsis thaliana transcriptome to phosphate starvation

Project description:This SuperSeries is composed of the following subset Series: GSE33790: The response and recovery of Arabidopsis thaliana transcriptome to phosphate starvation [ATH1-121501] GSE33996: The response and recovery of Arabidopsis thaliana transcriptome to phosphate starvation [At35b_MR] Refer to individual Series

2012-06-17 | E-GEOD-34004 | biostudies-arrayexpress

Transcriptional profiling of Arabidopsis thaliana grown under arsenate stress

2008-02-08 | GSE10425 | GEO

Project description:Phosphate starvation in Arabidopsis thaliana

| PRJNA649694 | ENA

The response and recovery of Arabidopsis thaliana transcriptome to phosphate starvation

Project description:The response and recovery of Arabidopsis thaliana transcriptome to phosphate starvation

| PRJNA150581 | ENA

Expression data from Arabidopsis thaliana under phosphate starvation stress

Project description:We performed a transcriptomic analysis of Pi starvation responses in Arabidopsis thaliana (Columbia-0) wild type plants under phosphate starvation stress and in plants with altered PHR1(-like) activity, comparing mutants of phr1 and phr1-phl1 grown in phosphate-lacking medium. Results show the central role of PHR1 and functionally redundant members of its family in the control of transcriptional responses to Pi starvation.

2010-12-09 | GSE16722 | GEO

Arabidopsis thaliana

Project description:The response and recovery of Arabidopsis thaliana transcriptome to phosphate starvation [At35b_MR]

| PRJNA156451 | ENA

Transcriptome analysis of estradiol-inducible overexpression of transcription factor WRKY75 in Arabidopsis thaliana

Project description:Sequence-specific transcription factor WRKY75 is highly responsive to reactive oxygen species on transcriptional level in the rosettes of Arabidopsis thaliana. In addition, it acts in developmental responses, acquisition of nutrients, and in stress responses. In the root, WRKY75 is a repressor of root hair formation, it regulates the phosphate starvation response, and the response to certain pathogens. In order to find the target genes of WRKY75, the effects of estradiol-inducible overexpression of WRKY75 on transcriptome was studied using RNA-seq.

2016-04-03 | GSE79856 | GEO

Arabidopsis thaliana

Project description:The response and recovery of Arabidopsis thaliana transcriptome to phosphate starvation [ATH1-121501]

| PRJNA156439 | ENA

Transcriptional profiling of Arabidopsis thaliana grown under arsenate stress

Project description:We examined the changes in gene expression in Arabidopsis thaliana grown under arsenate stress. The transcriptional profiling reveals antioxidant activity and repression of the phosphate starvation response. Keywords: dual label, stress response This experiment included a comparison of three biological replicate controls against three biological arsenate-stressed replicates with a dye-swap technical replicate for a total of six microarray slide hybridizations.

2010-05-26 | E-GEOD-10425 | biostudies-arrayexpress

Whole Genome Bisulfite sequencing of Arabidopsis thaliana High and Low phosphate methylomes

Project description:Pi availability is a significant limiting factor for plant growth in both natural and agricultural systems. To cope with such limiting conditions, plants have adapted developmental and biochemical strategies to enhance Pi acquisition and to avoid starvation. A myriad of genes that are involved in the regulation and display of these strategies have been identified. However, the possible epigenetic components regulating the phosphate starvation responses have not been thoroughly investigated. DNA methylation is a major epigenetic mark involved in diverse biological processes and it may play a critical role in Pi starvation stress adaptation, also changes in DNA methylation can lead to a unique gene expression pattern in response to specific developmental and environmental conditions. Here in we demonstrate that non-CpG DNA methylation is required for proper expression of a number of Pi-limitation responsive genes in Arabidopsis thaliana and results in altered morphologic and physiologic phosphate starvation responses.Our data suggest that DNA methylation is involved in the modulation of Pi starvation responses via the transcriptional regulation of a set of phosphate-starvation responsive genes.

2015-12-31 | GSE72770 | GEO

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data