Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

E-MEXP-1407

ABSTRACT: Transcription profiling by array of S. cerevisiae wild type, SNF1, SNF4, and double knock outs to investigate SNF1/4 dependent gene expression

PROVIDER: E-MEXP-1407 | ExpressionAtlas | 2015-10-22

REPOSITORIES: ExpressionAtlas

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	E-MEXP-1407-analysis-methods.tsv	Tabular
	E-MEXP-1407-atlasExperimentSummary.Rdata	Rdata
	E-MEXP-1407-configuration.xml	Xml
	E-MEXP-1407-percentile-ranks.tsv	Tabular
	E-MEXP-1407.condensed-sdrf.tsv	Tabular

Items per page:

1 - 5 of 73

Similar Datasets

E-GEOD-20591

Project description:Transcription profiling by array of yeast to investigate expression of the beta-subunit of Snf1 kinase

2015-09-15 | E-GEOD-20591 | ExpressionAtlas

E-MEXP-3328

Project description:Transcription profiling by array of Arabidopsis wild-type seedlings and either single or double knock-out mutants of LETM1 or LETM2

2015-11-23 | E-MEXP-3328 | ExpressionAtlas

E-MEXP-1578

Project description:Transcription profiling by array of Arabidopsis pmg1 pmg2 double knock out plants

2014-07-03 | E-MEXP-1578 | ExpressionAtlas

E-MEXP-3623

Project description:Transcription profiling by array of peritoneal macrophages from B6 wild type and B6-Rag1 knock-out mice

2014-07-03 | E-MEXP-3623 | ExpressionAtlas

E-MEXP-3309

Project description:Transcription profiling by array of Arabidopsis tim23 knock-out and over-expressing plants compared to wild-type

2016-01-04 | E-MEXP-3309 | ExpressionAtlas

E-MEXP-2371

Project description:Transcription profiling by array of Arabidopsis thaliana WRKY18/40 double knock out infected with Golovinomyces orontii

2015-11-02 | E-MEXP-2371 | ExpressionAtlas

E-ATMX-6

Project description:Transcription profiling by array of Arabidopsis wild type and MYB knock out plants

2014-07-03 | E-ATMX-6 | ExpressionAtlas

E-MEXP-3867

Project description:Transcription profiling by array of A. thaliana U11U12-65k mutant vs Col-0 wild type to investigate differently regulated genes

2015-06-05 | E-MEXP-3867 | ExpressionAtlas

Coordinate transcriptional activation of salicylic acid and trehalose synthesis, oxidative/ER stress and innate immunity pathways by inducible artificial microRNA silencing of the SNF4 activator subunit of Arabidopsis SnRK1

Project description:Arabidopsis SnRK1 is structurally and functionally related to the yeast Snf1 and mammalian AMP-activated kinases, which are activated in response to carbon/glucose limitation and stress conditions causing an imbalance of energy homeostasis increasing the AMP/ATP ratio. Mutations of the SNF4 activating subunit of trimeric Arabidopsis SnRK1 complexes are not transmitted through the male meiosis. Silencing of SNF4 by a β-estradiol-inducible artificial microRNA (amiR-SNF4) constructs was used to examine how inhibition of SnRK1 affects transcriptional regulation of different cellular pathways in dark and light grown seedlings. This study shows that amiR-SNF4 silencing of SnRK1 leads to coordinate transcriptional activation of salicylic acid and trehalose synthesis, oxidative/endoplasmic reticulum stress and pathogen defense responses by inducing simultaneous changes in numerous other essential hormonal and metabolic pathways in Arabidopsis. We used Affymetrix ATH1-121501 Genome Array to compare global transcript levels in wild type and β-estradiol-induced amiR-SNF4 mutant seedlings 5 days after germination in the dark or light.

2016-05-01 | GSE72674 | GEO

E-MEXP-1431

Project description:Transcription profiling by array of Mdm2 knock out mice

2014-07-03 | E-MEXP-1431 | ExpressionAtlas