Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

E-MTAB-10238

ABSTRACT: Intestinal ulcers from biopsy-wounded wild-type and Bmp4-overexpressing mice

PROVIDER: E-MTAB-10238 | ExpressionAtlas | 2023-06-15

REPOSITORIES: ExpressionAtlas

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	E-MTAB-10238-analysis-methods.tsv	Tabular
	E-MTAB-10238-analytics.tsv	Tabular
	E-MTAB-10238-atlasExperimentSummary.Rdata	Rdata
	E-MTAB-10238-configuration.xml	Xml
	E-MTAB-10238-g1_g2-mvaPlot.png	Other

Items per page:

1 - 5 of 56

Similar Datasets

Intestinal ulcers from biopsy-wounded wild-type and Bmp4-overexpressing mice

Project description:Intestinal ulcers from biopsy-wounded wild-type and Bmp4-overexpressing mice

| PRJEB40623 | ENA

E-MTAB-7315

Project description:RNA-seq analysis of colonic intestinal epithelial cells (IECs) isolated from naive wild-type C57BL/6 mice, DSS-treated wild-type C57BL/6 mice, Il10-/- C57BL/6 mice and Il10-/- C57BL/6 mice with IEC-specific Rabgef1 deletion

2019-01-16 | E-MTAB-7315 | ExpressionAtlas

Intestinal ulcers from biopsy-wounded wild-type and Bmp4-overexpressing mice

Project description:We performed RNAseq on ulcers and distant normal tissue from biopsy-wounded wild-type and Bmp4-overexpressing (Vil1-Cre;Rosa26-Bmp4) mice to investigate differences in gene expression between tissue states and genotypes. Biopsy wounding was performed by taking three biopsies from well-separated areas in the colon wall using forceps. Small tissue pieces were excised from the ulcers and distant normal colon tissue and collected for RNA sequencing.

2021-05-09 | E-MTAB-10238 | biostudies-arrayexpress

E-MEXP-1314

Project description:Transcription profiling of cerebellum cells from wild type mice or mice overexpressing TATA-binding protein (TBP) or a mutant version of TBP

2014-08-16 | E-MEXP-1314 | ExpressionAtlas

E-GEOD-60780

Project description:Gene expression profiling in mice overexpressing human wild type (WT) keratin 8 (K8) or K8 variants (G62C and R341H).

2015-07-29 | E-GEOD-60780 | ExpressionAtlas

E-MTAB-9180

Project description:RNA-seq of intestinal crypts vs intestinal smooth muscle with a specific MMP17 deletion compared to wild-type

2021-03-22 | E-MTAB-9180 | ExpressionAtlas

E-MTAB-8796

Project description:RNA-Seq of enteroids from wild-type and Tnfaip8 knockout mice.

2021-03-22 | E-MTAB-8796 | ExpressionAtlas

E-GEOD-58948

Project description:Transcription profiling by array of small intestinal crypt base epithelial cells (Paneth cells) from wild-type and Nod2-/- mice

2014-10-16 | E-GEOD-58948 | ExpressionAtlas

E-GEOD-17438

Project description:Transcriptional profiling of intestinal tissue samples from germ-free and conventionally raised mice which are either wild-type or Myd88-/-

2014-07-09 | E-GEOD-17438 | ExpressionAtlas

E-GEOD-50188

Project description:Transcription profiling by array of intestinal epithelial cells (IECs) from mice with IEC-specific HDAC3 deletion against wild type controls

2014-10-17 | E-GEOD-50188 | ExpressionAtlas

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

Tweets

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data