Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

E-MTAB-3198

ABSTRACT: Regulation of the ESC transcriptome by nuclear long non-coding RNAs

PROVIDER: E-MTAB-3198 | ExpressionAtlas | 2019-05-14

REPOSITORIES: ExpressionAtlas

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	E-MTAB-3198-analysis-methods.tsv	Tabular
	E-MTAB-3198-analytics.tsv	Tabular
	E-MTAB-3198-analytics.tsv.undecorated	Tabular
	E-MTAB-3198-analytics.tsv.undecorated.unrounded	Tabular
	E-MTAB-3198-analytics.tsv.unrounded	Tabular

Items per page:

1 - 5 of 1384

Similar Datasets

Regulation of the ESC transcriptome by nuclear long non-coding RNAs

Project description:Regulation of the ESC transcriptome by nuclear long non-coding RNAs

| PRJEB8090 | ENA

Project description:Long non-coding RNAs regulate adipogenesis

| PRJNA140805 | ENA

Profiling long non-coding RNA expression in oral premalignant lesions.

Project description:Oral epithelial dysplasias are believed to progress through a series of histopathological stages; from mild to severe dysplasia, to carcinoma in situ, and finally to invasive OSCC. Underlying this change in histopathological grade are gross chromosome alterations and changes in gene expression of both protein-coding genes and non-coding RNAs. Recent papers have described associations of aberrant expression of microRNAs, one class of non-coding RNAs, with oral cancer. However, expression profiling of long non-coding RNAs (lncRNAs) has not been reported. Long non-coding RNAs are a novel class of mRNA-like transcripts with no protein coding capacity, but with a variety of functions including roles in epigenetics and gene regulation. In recent reports, the aberrant expression of lncRNAs has been associated with human cancers, suggesting a critical role in tumorigenesis. Here, we present the first long non-coding RNA expression map for the human oral mucosa. We describe the expression of 325 long non-coding RNAs, suggesting lncRNA expression contributes significantly to the oral transcriptome. Intriguingly, 60% of the detected lncRNAs show aberrant expression in oral premalignant lesions. A number of these lncRNAs have been previously associated with other human cancers.

2011-08-15 | GSE31021 | GEO

Relevance study and prognostic analysis for intestinal flora disorders affecting non-coding RNA networks in patients with advanced lung cancer

Project description:Interventions: Case series:Nil Primary outcome(s): intestinal microecological disorders;blood non-coding RNAs and immune status Study Design: Randomized parallel controlled trial

| 2681498 | ecrin-mdr-crc

Long non-coding RNAs in B cells

Project description:Long non-coding RNAs in B cells

| PRJNA292725 | ENA

Project description:Long non-coding RNAs in Paramecium tetraurelia

| PRJNA789403 | ENA

Mus musculus

Project description:Long non-coding RNAs regulate adipogenesis (Affymetrix)

| PRJNA155323 | ENA

Project description:long non-coding RNAs in Cucumis melo

| PRJNA543288 | ENA

Profiling long non-coding RNA expression in oral premalignant lesions.

2011-08-14 | E-GEOD-31021 | biostudies-arrayexpress

Deregulated long non-coding transcripts in M1 and M2 macrophages

Project description:Non-coding transcripts make up around 98 % of RNAs in the transcriptome of cells, while only around 2 % are coding for proteins. Long non-coding RNAs (> 200bp) are known to have high regulatory functions in various cellular processes. Here, we aimed to characterize the distinct macrophage phenotypes regarding their expression of long non-coding RNAs, which might be involved in the activation process.

2023-05-16 | GSE195440 | GEO

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

Tweets

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data