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E-MTAB-4748

ABSTRACT: RNA-seq of coding RNA in human fibroblasts, Peripheral Blood Mononuclear Cells (PBMCs) and induced pluripotent stem cells (iPS cells) as part of the HipSci project

PROVIDER: E-MTAB-4748 | ExpressionAtlas | 2025-01-23

REPOSITORIES: ExpressionAtlas

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			Action	DRS
	E-MTAB-4748-analysis-methods.tsv	Tabular
	E-MTAB-4748-atlasExperimentSummary.Rdata	Rdata
	E-MTAB-4748-coexpressions.tsv.gz	Tabular
	E-MTAB-4748-configuration.xml	Xml
	E-MTAB-4748-factors.xml	Xml

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RNA-seq of coding RNA in human fibroblasts, PBMCs and induced pluripotent stem cells (iPS cells) as part of the HipSci project

Project description:The Human Induced Pluripotent Stem Cells Initiative (HipSci) project brings together diverse constituents in genomics, proteomics, cell biology and clinical genetics to create a UK national induced pluripotent stem cell (iPS cell) resource and use it to carry out cellular genetic studies. In this sub-study we performed Expression analysis using the using RNAseq of fibroblasts, peripheral blood mononuclear cells (PBMCs) and induced pluripotent stem cells (iPS cells) generated from the skin biopsies or blood of healthy volunteers. This experiment includes the data and expands the metadata from two obsolete ArrayExpress accessions (E-ERAD-216 and E-ERAD-327) for use in the Expression Atlas. For samples derived from E-ERAD-216 the raw data is stored in the European Genome-Phenome Archive (EGA) and is subject to access control. Data from E-ERAD-327 is stored in the European Nucleotide Archive (ENA) and is publicly available.

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