Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

E-PROT-148

ABSTRACT: Proteomics of the dentate gyrus reveals semantic dementia specific molecular pathology

DISEASE(S): Semantic Dementia,Normal

PROVIDER: E-PROT-148 | ExpressionAtlas | 2024-06-05

REPOSITORIES: ExpressionAtlas

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	E-PROT-148-MappedToGeneID.txt	Txt
	E-PROT-148-analysis-methods.tsv	Tabular
	E-PROT-148-configuration.xml	Xml
	E-PROT-148-factors.xml	Xml
	E-PROT-148-pipeline.pdf	Pdf

Items per page:

1 - 5 of 11

Similar Datasets

Native Chromatin Proteomics Reveals a Role for Specific Nucleoporins in Heterochromatin Organization and Maintenance.

Project description:Native Chromatin Proteomics Reveals a Role for Specific Nucleoporins in Heterochromatin Organization and Maintenance.

| PRJNA518033 | ENA

Integrative analysis of reprogramming human fibroblast cells to naïve pluripotency [ChIP-seq]

Project description:Derivation of human naïve cells in the ground state of pluripotency provides promising avenues for developmental studies and therapeutic manipulations. However, the molecular mechanisms involved in establishment and maintenance of human naïve pluripotency remain poorly understood. Using the human inducible reprogramming system together with 5iLAF naïve induction strategy, we performed integrative analysis across the timeline from human fibroblasts to naïve iPSCs, which reveals ordered expression waves of gene networks sharing signatures with embryonic development process from post-implantation to pre-implantation stages. We also observed a significant transient re-activation of transcripts with 8-cell-stage-like characteristics in late naïve reprogramming stages. Moreover, combined quantitative proteomics analysis with transcriptional dynamics during naïve pluripotency induction, we identified ALPPL2 as the specific surface marker for human naïve pluripotency. Altogether, our study deepens the understanding of molecular mechanisms of human naïve pluripotency.

2018-03-03 | GSE89058 | GEO

E-PROT-146

Project description:Proteomics of thyroid tumours - Proteomics of thyroid tumours provides new insights into their molecular composition and changes associated with malignancy

2024-06-05 | E-PROT-146 | ExpressionAtlas

A-Prot: protein structure modeling using MSA transformer.

Project description: Not available

| S-EPMC8925138 | biostudies-literature

Cell and sub-compartment specific proteomics reveals astrocyte contributions in a mouse model of OCD

Project description:Cell and sub-compartment specific proteomics reveals astrocyte contributions in a mouse model of OCD

| PRJNA766219 | ENA

Mining the UniProtKB/Swiss-Prot database for antimicrobial peptides.

Project description: Not available

| S-EPMC11917140 | biostudies-literature

Noise exposures causing hearing loss generate proteotoxic stress and activate the proteostasis network

Project description:We investigate how noise insults affect the cochlea with proteomics and functional assays. Quantitative proteomics reveals that exposure to loud noise causes proteotoxicity. We identify and confirm hundreds of proteins that accumulate, including cytoskeletal proteins, and several nodes of the proteostasis network. Transcriptomic analysis reveals that a subset of the genes encoding these proteins also increase acutely after noise exposure, including numerous proteasome subunits.

2020-11-03 | GSE160639 | GEO

Project description:Comparative proteomics of Listeria monocytogenes strains of food and clinical origin reveals strain-specific adaptation mechanisms

| PRJNA1267817 | ENA

ProT-VAE: Protein Transformer Variational AutoEncoder for functional protein design.

Project description: Not available

| S-EPMC12541330 | biostudies-literature

Synaptic Schwann cells: specific labeling reveals unique cellular and molecular features

Project description:Synaptic Schwann cells: specific labeling reveals unique cellular and molecular features

| PRJNA640384 | ENA