Browse
Submit Data
Databases
API
Help

Metabolomics,Unknown,Transcriptomics,Genomics,Proteomics

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Time course following a low light to high light shift

ABSTRACT: Time course following a low light to high light shift. Strains used are wild type (CC-125) and npq1 lor1. Results in "VALUE" column are the log2 of Cy3/Cy5 ratios following normalization in SNOMAD.

ORGANISM(S): Chlamydomonas reinhardtii

SUBMITTER: Heidi Ledford

PROVIDER: E-GEOD-1006 | biostudies-arrayexpress |

REPOSITORIES: biostudies-arrayexpress

ACCESS DATA

Json Xml

Similar Datasets

Molecular classification of failing hearts from coronary and myopathic patients

Project description:RNA form the heart a goupe of 9 patients with end stage cardiomyopathy (CAD) and 11 patiensts with coronary artery disease (CAD) was hybridized against pooled RNA form 4 normal nonfailing hearts.

2010-06-06 | E-GEOD-2014 | biostudies-arrayexpress

14028 time course on swarming plates

Project description:Salmonella 14028 time course on swarming agar (0.6%) plates mRNA from 3 h time point on swarming plates used as reference for all the time course arrays

2010-10-08 | E-GEOD-1625 | biostudies-arrayexpress

Transcription profiles of che and flgM mutants of Typhimurium 14028 at 3h on agar plates

Project description:Transcription profiles of Typhimurium 14028 wt versus 14028 cheA, cheB, cheZ, flgM and flgM/cheY mutants at 3h on agar plates

2010-06-09 | E-GEOD-2341 | biostudies-arrayexpress

14028 cheY mutant time course expression on plate

Project description:time course of transcriptional profile of Typhimurium 14028 wt versus 14028 cheY mutant on agar plate

2010-06-09 | E-GEOD-2340 | biostudies-arrayexpress

WT 14028 versus mutant

Project description:WT 14028 versus mutant

2010-06-10 | E-GEOD-2455 | biostudies-arrayexpress

growth culture comparisons

Project description:All the other array data are here, including plate culture versus broth culture, swarming agar culture versus hard agar culture, wildtype versus mutants other than che, and so on

2010-10-08 | E-GEOD-1633 | biostudies-arrayexpress

14028 time course on non-swarming plates

Project description:Salmonella strain 14028, time course, on non-swarming agar plates (1.5%), array were done between reference mRNA (from swarmer cells at 3 hour) and mRNA from various time points on non-swarming plates.

2010-06-06 | E-GEOD-1631 | biostudies-arrayexpress

14028 versus che mutants

Project description:Salmonella wild type strain 14028 compared with chemotaxis mutants, cheA, cheB, cheY, and cheZ at various time points both in broth medium and on swarming plates

2004-09-02 | E-GEOD-1632 | biostudies-arrayexpress

P. vivax: proof-of-principle global transcription analysis from two wild isolates

Project description:The complete genome sequence of the P. vivax Sal-1 strain allowed the design of a first version array representing 1 oligo/2 kb of coding sequences (http://zblab.sbs.ntu.edu.sg/vivax/index.html). Here, proof-of-principle experiments using total RNA of parasites obtained from the Sal-1 strain, from P. falciparum and from parasites obtained directly from two human patients are presented. To determine the extent of cross-hybridization of P. falciparum with P. vivax, and to determine overlaps in expression profiles of the P. vivax Sal1 monkey-adapted strain vs wild isolates, single dual hybridization analyses were performed.

2008-04-12 | E-GEOD-11075 | biostudies-arrayexpress

stress response

Project description:Hybridization of one kidney of cortisol treated fish vs. one kidney of control fish. Kidneys were collected from untreated juvenile sea bream (n=4) and from fish, which received for 72h a coconut-oil implant containing 10mg/Kg (fish wet weight) (n=4) cortisol. Experiments were carried out at the University of the Algarve, Portugal in accordance with National legislation for the welfare of animals. Experiments were conducted in two 125 l cylindriconical tanks supplied with a continuous through-flow of oxygenated seawater at 20+1 Â°C using juvenile sea bream (25 g + 3 g) adapted for 1 week to the experimental conditions. One tank contained 8 untreated fish (control) and the other tank 8 cortisol treated fish and the end of experiments fish were removed form tanks, decapitated and the kidneys rapidly removed and place in RNAlater (Qiagen) at â20 Â°C. No mortality occurred in the control tank but 2 fish died in the cortisol treated tank.

2010-06-11 | E-GEOD-2064 | biostudies-arrayexpress

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data