Highly integrated epigenome maps in Arabidopsis - small RNA sequencing
Ontology highlight
ABSTRACT:
ORGANISM(S): Arabidopsis thaliana
SUBMITTER: Joseph Ecker
PROVIDER: E-GEOD-10967 | biostudies-arrayexpress |
REPOSITORIES: biostudies-arrayexpress
Publications
Highly integrated single-base resolution maps of the epigenome in Arabidopsis.
Lister Ryan R O'Malley Ronan C RC Tonti-Filippini Julian J Gregory Brian D BD Berry Charles C CC Millar A Harvey AH Ecker Joseph R JR
Cell 20080501 3
Deciphering the multiple layers of epigenetic regulation that control transcription is critical to understanding how plants develop and respond to their environment. Using sequencing-by-synthesis technology we directly sequenced the cytosine methylome (methylC-seq), transcriptome (mRNA-seq), and small RNA transcriptome (smRNA-seq) to generate highly integrated epigenome maps for wild-type Arabidopsis thaliana and mutants defective in DNA methyltransferase or demethylase activity. At single-base ...[more]
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