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Metabolomics,Unknown,Transcriptomics,Genomics,Proteomics

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Transcription profiling of Arabidopsis wt and pkl mutant germinating seeds treated with uniconazole

ABSTRACT: Relative expression data from germinating seeds of Columbia (wt), the pkl mutant (pkl), Columbia plus uniconazole-P (Uwt) and the pkl-mutant plus uniconazole-P (Upkl). Experiment Overall Design: Each experimental condition (wt, pkl, Uwt and Upkl) has six biological replicates for a total of 24 chips.

ORGANISM(S): Arabidopsis thaliana

SUBMITTER: Joe Ogas

PROVIDER: E-GEOD-11852 | biostudies-arrayexpress |

REPOSITORIES: biostudies-arrayexpress

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The CHD3 remodeler PICKLE promotes trimethylation of histone H3 lysine 27.

Zhang Heng H Rider Stanley Dean SD Henderson James T JT Fountain Matthew M Chuang King K Kandachar Vasundhara V Simons Alexis A Edenberg Howard J HJ Romero-Severson Jeanne J Muir William M WM Ogas Joe J

The Journal of biological chemistry 20080606 33

CHD3 proteins are ATP-dependent chromatin remodelers that contribute to repression of developmentally regulated genes in both animal and plant systems. In animals, this repression has been linked to a multiple subunit complex, Mi-2/NuRD, whose constituents include a CHD3 protein, a histone deacetylase, and a methyl-CpG-binding domain protein. In Arabidopsis, PICKLE (PKL) codes for a CHD3 protein that acts during germination to repress expression of seed-associated genes. Repression of seed-assoc ...[more]

PMID: 18539592

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