RNAi profiling of Arabidopsis knocked down and overexpressing CIN-TCP genes

ABSTRACT: Leaf development has been monitored chiefly by following anatomical markers. Analysis of transcriptome dynamics during leaf maturation revealed multiple expression patterns that rise or fall with age or that display age specific peaks. These were used to formulate a digital differentiation index (DDI), based on a set of selected markers with informative expression during leaf ontogeny. The leaf-based DDI reliably predicted the developmental state of leaf samples from diverse sources and was independent of mitotic cell division transcripts or propensity of the specific cell type. When calibrated by informative root markers, the same algorithm accurately diagnosed dissected root samples. We used the DDI to characterize plants with reduced activities of multiple CINCINNATA (CIN)-TCP growth re

ORGANISM(S): Arabidopsis thaliana

SUBMITTER: Idan Efroni 

PROVIDER: E-GEOD-12691 | biostudies-arrayexpress |

REPOSITORIES: biostudies-arrayexpress