Metabolomics,Unknown,Transcriptomics,Genomics,Proteomics

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Methylation changes occurring in early postnatal liver development


ABSTRACT: Genomic DNA is isolated from C57BL6/J mice at E17.5 and postnatal d21, and we used MCAM to identify genes undergoing methylation change during late fetal to early postnatal mouse liver development. Two-condition experiment, P21 vs. E17.5. Biological replicates: 2 for each condition.

ORGANISM(S): Mus musculus

SUBMITTER: Robert Waterland 

PROVIDER: E-GEOD-15634 | biostudies-arrayexpress |

REPOSITORIES: biostudies-arrayexpress

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Publications

Epigenomic profiling indicates a role for DNA methylation in early postnatal liver development.

Waterland Robert A RA   Kellermayer Richard R   Rached Marie-Therese MT   Tatevian Nina N   Gomes Marcus V MV   Zhang Jiexin J   Zhang Li L   Chakravarty Abrita A   Zhu Wei W   Laritsky Eleonora E   Zhang Wenjuan W   Wang Xiaodan X   Shen Lanlan L  

Human molecular genetics 20090520 16


The question of whether DNA methylation contributes to the stabilization of gene expression patterns in differentiated mammalian tissues remains controversial. Using genome-wide methylation profiling, we screened 3757 gene promoters for changes in methylation during postnatal liver development to test the hypothesis that developmental changes in methylation and expression are temporally correlated. We identified 31 genes that gained methylation and 111 that lost methylation from embryonic day 17  ...[more]

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