SNEP: Simultaneous detection of nucleotide and expression polymorphisms using Affymetrix GeneChip
Ontology highlight
ABSTRACT:
ORGANISM(S): Oryza sativa Japonica Group
SUBMITTER: Nori Kurata
PROVIDER: E-GEOD-16265 | biostudies-arrayexpress |
REPOSITORIES: biostudies-arrayexpress
Publications
SNEP: Simultaneous detection of nucleotide and expression polymorphisms using Affymetrix GeneChip.
Fujisawa Hironori H Horiuchi Youko Y Harushima Yoshiaki Y Takada Toyoyuki T Eguchi Shinto S Mochizuki Takako T Sakaguchi Takayuki T Shiroishi Toshihiko T Kurata Nori N
BMC bioinformatics 20090506
<h4>Background</h4>High-density short oligonucleotide microarrays are useful tools for studying biodiversity, because they can be used to investigate both nucleotide and expression polymorphisms. However, when different strains (or species) produce different signal intensities after mRNA hybridization, it is not easy to determine whether the signal intensities were affected by nucleotide or expression polymorphisms. To overcome this difficulty, nucleotide and expression polymorphisms are current ...[more]
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