Metabolomics,Unknown,Transcriptomics,Genomics,Proteomics

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Aerobic transcriptome of Porphyromonas gingivalis


ABSTRACT: Transcriptional profiling of P. gingivalis cells comparing control cells grown in anaerobic conditions with cells grown in the presence of 6% of oxygen Two-condition experiment, anaerobically vs. aerobically grown cells. Biological replicates: 3 independently grown and harvested bacterial cells. Two technical replicates for two experiments. Four replicates per array.

ORGANISM(S): Porphyromonas gingivalis

SUBMITTER: Janina Lewis 

PROVIDER: E-GEOD-17960 | biostudies-arrayexpress |

REPOSITORIES: biostudies-arrayexpress

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Publications

Adaptation of Porphyromonas gingivalis to microaerophilic conditions involves increased consumption of formate and reduced utilization of lactate.

Lewis Janina P JP   Iyer Divya D   Anaya-Bergman Cecilia C  

Microbiology (Reading, England) 20090814 Pt 11


Porphyromonas gingivalis, previously classified as a strict anaerobe, can grow in the presence of low concentrations of oxygen. Microarray analysis revealed alteration in gene expression in the presence of 6 % oxygen. During the exponential growth phase, 96 genes were upregulated and 79 genes were downregulated 1.4-fold. Genes encoding proteins that play a role in oxidative stress protection were upregulated, including alkyl hydroperoxide reductase (ahpCF), superoxide dismutase (sod) and thiol p  ...[more]

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