Transcriptome of Aspergillus oryzae following ER stress

ABSTRACT: The Aspergillus oryzae, an important filamentous fungus used in food fermentation and enzyme industry, has been revealed to own prominent features in its genomic compositions by genome sequencing and various other tools. However, the functional complexity of the A. oryzae transcriptome has not yet been fully elucidated. Here, we applied direct high-throughput paired-end RNA sequencing (RNA-Seq) to the transcriptome of A. oryzae under four different culture conditions and confirmed most of the annotated genes. Moreover, with high resolution and sensitivity afforded by RNA-Seq, we were able to identify a substantial number of novel transcripts, new exons, untranslated regions, alternative upstream initiation codons (uATGs) and upstream open reading frames (uORFs), which serves a remarkable i

ORGANISM(S): Aspergillus oryzae

SUBMITTER: Guangwu Guo 

PROVIDER: E-GEOD-18851 | biostudies-arrayexpress |

REPOSITORIES: biostudies-arrayexpress